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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs62402006 chr6:26903384 T/G ZNF322B chr9:99957633-99961910:- 0.54 10 1.65E-21 Box Plot
THCA rs62423853 chr6:116645466 C/T ECSIT chr19:11616731-11639989:- -0.23 -6.14 1.69E-9 Box Plot
THCA rs62423855 chr6:116650558 A/G ECSIT chr19:11616731-11639989:- -0.22 -6.2 1.24E-9 Box Plot
THCA rs62423856 chr6:116651832 A/C ECSIT chr19:11616731-11639989:- -0.24 -6.39 3.92E-10 Box Plot
THCA rs62488721 chr8:11201504 T/G SGK223 chr8:8175258-8244008:- -0.36 -6.58 1.22E-10 Box Plot
THCA rs62490410 chr7:140124604 T/G LOC441455 chr9:99488103-99489749:+ 0.51 6.46 2.57E-10 Box Plot
THCA rs62490427 chr7:140140890 T/C LOC441455 chr9:99488103-99489749:+ 0.49 6.49 2.18E-10 Box Plot
THCA rs62490429 chr7:140140974 A/G LOC441455 chr9:99488103-99489749:+ 0.51 6.79 3.31E-11 Box Plot
THCA rs62490449 chr7:140170574 G/A LOC441455 chr9:99488103-99489749:+ 0.48 6.29 7.18E-10 Box Plot
THCA rs62493599 chr8:11787707 T/G SGK223 chr8:8175258-8244008:- -0.46 -8.55 1.64E-16 Box Plot
THCA rs62493601 chr8:11788307 C/T SGK223 chr8:8175258-8244008:- -0.45 -8.43 3.96E-16 Box Plot
THCA rs62493615 chr8:11789683 C/G SGK223 chr8:8175258-8244008:- -0.45 -8.44 3.94E-16 Box Plot
THCA rs62493617 chr8:11790764 A/G SGK223 chr8:8175258-8244008:- -0.45 -8.32 9.23E-16 Box Plot
THCA rs62503523 chr8:3247936 A/G CSMD1 chr8:2792875-4852494:- -0.52 -5.91 6.64E-9 Box Plot
THCA rs62505576 chr8:3285174 A/G CSMD1 chr8:2792875-4852494:- -0.5 -5.94 5.56E-9 Box Plot